From: DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment
Method (Protein) | RV11 | RV12 | RV20 | RV30 | RV40 | RV50 | Total |
---|---|---|---|---|---|---|---|
DIALIGN-TX 1.0 | 26.53 | 75.23 | 30.49 | 38.53 | 44.82 | 46.56 | 44.34 |
DIALIGN-T 0.2.2 | 25.320 | 72.550 | 29.200 | 34.90- | 45.230 | 44.250 | 42.76- |
DIALIGN 2.2 | 26.500 | 69.55- | 29.220 | 31.23- | 44.120 | 42.50- | 41.49-- |
CLUSTAL W2 | 22.740 | 71.590 | 21.980 | 27.23- | 39.550 | 30.75- | 37.35-- |
T-COFFEE 5.56 | 31.340 | 81.18++ | 37.81+ | 36.570 | 48.200 | 50.630 | 48.54++ |
POA V2 | 15.26-- | 63.84-- | 23.34- | 28.23- | 33.67-- | 27.00-- | 33.37-- |
MAFFT 6.240 L-INSi | 44.61 ++ | 83.75++ | 45.27 ++ | 56.93++ | 59.69 ++ | 56.19+ | 58.57 ++ |
MAFFT 6.240 E-INSi | 43.71++ | 83.43++ | 44.63++ | 58.80 ++ | 58.33++ | 58.94 ++ | 58.37++ |
MUSCLE 3.7 | 33.03+ | 80.46++ | 35.220 | 38.770 | 45.960 | 44.940 | 47.58++ |
PROBCONS 1.12 | 41.68++ | 85.52 ++ | 40.49++ | 54.37++ | 52.90++ | 56.50++ | 55.66++ |