Signal | Domains ([5]) | Domains (Here) | Boundaries ([5]) | Boundaries (Here) |
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CTCF (IMR90) |
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CTCF (mESC) |
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H3K4me3 (mESC) |
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H3K27AC (mESC) |
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- Each table entry is of the form where e is the number of elements containing ≥1 of CTCF and histone modifications, t is the total number of elements and r is the approximate ratio e/t. Our method produces more domains, and hence more boundaries, than that of Dixon et al. [5]. However, relative to Dixon et al., our domains are depleted for peaks of interest, while our boundaries are significantly enriched for such peaks.