From: The distance and median problems in the single-cut-or-join model with single-gene duplications
Events | Adj. in true median | Cand. adj. | Adj. in ILP median | Precision | Recall | \(\%\) Adj. common to all genomes | \(\%\) Adj. common to two genomes | No. of optimal solutions | Avg. time per run (in sec) |
---|---|---|---|---|---|---|---|---|---|
100 | 1514 | 1503 | 1493 | 0.9998 | 0.9859 | 86.43 | 13.57 | 2.3 | 53 |
200 | 1107 | 1062 | 1044 | 0.9991 | 0.9428 | 69.49 | 30.51 | 15.8 | 29 |
300 | 1312 | 1192 | 1155 | 0.9985 | 0.8758 | 52.94 | 47.06 | 40.3 | 38 |
400 | 1151 | 985 | 961 | 0.9981 | 0.8329 | 49.44 | 50.56 | 393.7 | 51 |
500 | 1430 | 1174 | 1132 | 0.9972 | 0.7897 | 46.68 | 53.32 | 3682.6 | 84 |