Table 4 Motifs identified with use of phylogenetic information. Listing of motifs and details of their host sequences for phylogenetic motif finding. All datasets tested are from [9]. DNA region details the DNA regions considered (PR signifies promoter region). # Seq. gives the number of input sequences. Motif (id) identifies the consensus sequence of the discovered motif and its correspondence with the motifs of [9] where applicable. All listed motifs have been documented as regulatory elements in TRANSFAC [45]. For datasets other than the insulin dataset, only the best motif is reported and for the insulin dataset multiple motifs are reported in order of discovery.

From: A combinatorial optimization approach for diverse motif finding applications