Figure 5
From: A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Model from Figure 3 expanded to include alternative splicing in terminal and initial exons and candidate single exon genes. Blue and beige states reflect possible protein coding exons (beige) or partial protein coding exons (blue) and represent three states for each state shown, one for each of the three coding phases. Special states "Beg" and "End" show the respective begin and end states in the model.