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Table 4 ExAlt results on the initial training and testing set in percentages.

From: A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons

  All Exons
  Sens Spec
ExAlt-Exon 82/-2 94/-1
ExAlt-Exon-ab initio 84/-3 86/+2
N-SCAN-Exon Union 82/0 82/-2
Augustus-Exon Union 81/0 81/+2
SNAP-Exon Union 81/0 77/0
SNAP+N-SCAN-Exon Union 83/0 72/0
Augustus+N-SCAN-Exon Union 83/0 75/-1
Aug.+SNAP+N-SCAN-Exon Union 84/0 68/+1
ExAlt-Frame 70/-2 87/-2
ExAlt-Frame-ab initio 72/-2 79/-3
ExAlt-Frame-Single 65/-1 91/-3
ExAlt-Default 65/0 78/-1
Ex Alt-Default -ab initio 65/0 66/-3
ExAlt-Default-Single 60/-1 84/-1
N-SCAN 56/-1 76/-2
Augustus 47/0 71/+2
SNAP 49/-1 67/0
  1. Included next to each measurement is the difference in percentage points compared to performance in the held out set in Table 2 and Table 3. (Aug. = Augustus)