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Table 4 Mean true positive rate and rank accordance rate in Escherichia coli K12.

From: Pattern statistics on Markov chains and sensitivity to parameter estimation

Markov order

1

2

3

4

5

6

TP rate

99.0%

98.0%

97.9%

94.4%

82.1%

47.6%

RA rate

99.0%

95.5%

91.5%

83.9%

68.0%

36.5%

× 103

383.33

95.83

23.96

5.99

1.50

0.37

  1. Both quantities are estimated with 1 000 simulations. We consider the 1 00 most over-represented octamers, the sequence length is ℓ = 4639675. The last row gives the sample size per free parameter (length n of the sequence divided by the number km(k - 1) of parameters).