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Table 1 Number of reference alignments and average Structure Conservation Index (SCI) for each alignment of k sequences.

From: An enhanced RNA alignment benchmark for sequence alignment programs

  k2 k3 k5 k7 k10 k15 total
no. aln. 8976 (118) 4835 2405 (481) 1426 845 504 18990
∅ SCI 0.95 (1.05) 0.92 0.91 (0.87) 0.90 0.89 0.89 0.93
  1. Values for the previously used data-set1 [22] are given in brackets.
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Algorithms for Molecular Biology

ISSN: 1748-7188