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Table 2 Pseudo periodic repeats of LPXA_ECOLI (matrix:blosum62, gap penalty: -4)

From: Finding the region of pseudo-periodic tandem repeats in biological sequences

Unit Pseudo-periodic unit Length Similarity with previous unit
1 MIDKSAFVHPTAIVEEGA 18  
2 SIGANAHIGPFCIVGPHV 18 14
3 EIGEGTVLKSHVVVNGHT 18 16
4 KIGRDNEIYQFASI 14 -7
5 GEVNQDLKYAGEPTR 15 -3
6 VEIGDRNRIRESVTI 15 2
7 HRGTVQGGGL 10 -14
8 TKVGSDNLLMINAHIAHD 18 -24
9 CTVGNRCILANNATLAGH 18 20
10 VSVDDFAIIGGMTAVHQF 18 4
11 CIIGAHVMVGGCSGV 15 4