Table 3 Comparison of the HSE- and CN measures for various proteins.
From: Reconstructing protein structure from solvent exposure using tabu search
Residues | Measure | < 7 Å RMSD | < 6 Å RMSD | < 5 Å RMSD | < 4 Å RMSD | < 3 Å RMSD | < 2 Å RMSD | lowest RMSD | lowest energy |
|---|---|---|---|---|---|---|---|---|---|
Human Endothelin (1EDN) | |||||||||
21 | CN | 100 | 100 | 98 | 60 | 18 | 0 | 2.09 | 0.00 |
HSE | 100 | 100 | 100 | 93 | 65 | 37 | 0.88 | 0.00 | |
Tryptophan Zipper 1(1LE0) | |||||||||
13 | CN | 100 | 100 | 100 | 100 | 100 | 22 | 1.38 | 0.00 |
HSE | 100 | 100 | 100 | 100 | 100 | 67 | 0.95 | 0.00 | |
Third Zinc Finger (1SRK) | |||||||||
35 | CN | 60 | 42 | 17 | (1SRK) 1 | 0 | 0 | 3.52 | 0.00 |
HSE | 56 | 33 | 13 | 5 | 0 | 0 | 3.02 | 0.33 | |
Mu-Conotoxin GIIA (1TCH) | |||||||||
23 | CN | 100 | 100 | 97 | 63 | 23 | 5 | 1.58 | 0.00 |
HSE | 100 | 100 | 100 | 97 | 61 | 38 | 0.91 | 0.00 | |
Pandinus Toxin (2PTA) | |||||||||
35 | CN | 59 | 32 | 14 | 3 | 0 | 0 | 3.17 | 0.00 |
HSE | 58 | 44 | 17 | 11 | 2 | 0 | 2.66 | 0.33 | |