Skip to main content
Figure 12 | Algorithms for Molecular Biology

Figure 12

From: SMOTIF: efficient structured pattern and profile motif search

Figure 12

SMOTIF and SMARTFINDER Comparison: Copia Motif. The figure compares SMOTIF-1, SMOTIF-2 and SMARTFINDER, when searching for the Copia retrotransposon in chromosome 1 of A. thaliana. (a) and (b) compare time and memory usage. (c) compares the constraint graph approach of SMARTFINDER with the positional joins in SMOTIF.

Back to article page