Table 1 A Simple Motif
From: SMOTIF: efficient structured pattern and profile motif search
Symbols | Motif | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | 0 | 0 | 0 | 4 | 1 | 1 | 7 | 0 | 5 | 1 | 0 | 2 | 0 | 2 | 0 | 0 | 0 |
C | 10 | 0 | 1 | 2 | 3 | 5 | 0 | 7 | 0 | 4 | 2 | 5 | 5 | 1 | 9 | 10 | 0 |
G | 0 | 10 | 9 | 4 | 5 | 3 | 2 | 3 | 0 | 3 | 1 | 1 | 4 | 1 | 1 | 0 | 10 |
T | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 5 | 2 | 7 | 2 | 1 | 6 | 0 | 0 | 0 |
IUPAC | C | G | S | V | N | N | D | S | W | N | B | N | B | N | S | C | G |