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Table 10 UASH and URS1H Binding Sites

From: SMOTIF: efficient structured pattern and profile motif search

Genes

UASH

URS1H

Distance

 

Site

Pos

Site

Pos

 

ZIP1

GATTCGGAAGTAAAA

-42

==TCGGCGGCTAAAT

-22

20

MEI4

TCTTTCGGAGTCATA

-121

==TGGGCGGCTAAAT

-98

23

DMC1

TTGTGTGGAGAGATA

-175

AAATAGCCGCCCA==

-143

32

SPO13

TAATTAGGAGTATAT

-119

AAATAGCCGCCGA==

-100

19

MER1

GGTTTTGTAGTTCTA

-152

TTTTAGCCGCCGA==

-115

37

SPO16

CATTGTGATGTATTT

-201

==TGGGCGGCTAAAA

-90

111

REC104

CAATTTGGAGTAGGC

-182

==TTGGCGGCTATTT

-93

89

RED1

ATTTCTGGAGATATC

-355

==TCAGCGGCTAAAT

-167

188

REC114

GATTTTGTAGGAATA

-288

==TGGGCGGCTAACT

-94

194

MEK1

TCATTTGTAGTTTAT

-233

==ATGGCGGCTAAAT

-150

83

Motif

NNDTBNGDWGDNNDH

 

==WBRGCSGCYVW==

 

[5,179]