From: SMOTIF: efficient structured pattern and profile motif search
Copia Motif | TNGA [12,14] TWNYTNNA [19,21] TNTMYRT [4,6] WNCCNNNNRG [72,95] TGNNA [100,125] TNTANRTNRAYGA |
---|---|
Motif 1 | HNGTNYDNHDNBTNNDNA [0,3] YNHTNYRHGGNBTNAR [0,2] ARDBNBH |
Motif 2 | TNVRNKAYNKNVVNDV [9,11] HNRR [6,8] YDNNVNNV [9,13] HB [4,5] TNNNNRBNYDBDNNRR |
Motif 3 | DNNNNDRYW [2,5] DS [6,7] HMM [1,2] TNDB |
Motif 4 | DBNNNND [48,102] KRRYMYNNNMRNHYNDVNYAYVH [7,10] VNNNYNNND [34,63] WD [2,8] KNNH [3,5] VNDDRNNNNNNHVNNNNNNNHHH |