Table 4 Improvements in the Information Content Scores.
From: Refining motifs by improving information content scores using neighborhood profile search
(l, d) | Initial Pattern | Score | First Tier Pattern | Score | Second Tier Pattern | Score |
|---|---|---|---|---|---|---|
(11,2) | AACGGTCGCAG | 125.1 | CCCGGTCGCTG | 147.1 | CCCGGGAGCTG | 153.3 |
(11,2) | ATACCAGTTAC | 145.7 | ATACCAGTTTC | 151.3 | ATACCAGGGTC | 153.6 |
(13,3) | CTACGGTCGTCTT | 142.6 | CCACGGTTGTCTC | 157.8 | CCTCGGGTTTGTC | 158.7 |
(13,3) | GACGCTAGGGGGT | 158.3 | GAGGCTGGGCAGT | 161.7 | GACCTTGGGTATT | 165.8 |
(15,4) | CCGAAAAGAGTCCGA | 147.5 | CCGCAATGACTGGGT | 169.1 | CCGAAAGGACTGCGT | 176.2 |
(15,4) | TGGGTGATGCCTATG | 164.6 | TGGGTGATGCCTATG | 166.7 | TGAGAGATGCCTATG | 170.4 |
(17,5) | TTGTAGCAAAGGCTAAA | 143.3 | CAGTAGCAAAGACTACC | 173.3 | CAGTAGCAAAGACTTCC | 175.8 |
(17,5) | ATCGCGAAAGGTTGTGG | 174.1 | ATCGCGAAAGGATGTGG | 176.7 | ATTGCGAAAGAATGTGG | 178.3 |
(20,6) | CTGGTGATTGAGATCATCAT | 165.9 | CAGATGGTTGAGATCACCTT | 186.9 | CATTTAGCTGAGTTCACCTT | 194.9 |
(20,6) | GGTCACTTAGTGGCGCCATG | 216.3 | GGTCACTTAGTGGCGCCATG | 218.8 | CGTCACTTAGTCGCGCCATG | 219.7 |