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Table 5 Comparison of STM to competing clustering methods for clusters with 9 or more members

From: A novel functional module detection algorithm for protein-protein interaction networks

Method

Number

Size

Discard(%)

Function

Location

STM

45

52.4

11.5

16.8

9.01

Maximal clique

N/A

N/A

N/A

N/A

N/A

Quasi clique

46

16.7

86.7

15.3

9.34

Samantha

17

12.3

93.3

15.9

7.65

Minimum cut

44

24.3

55.0

14.8

8.78

Bwtweenness cut

78

14.4

50.5

11.3

6.05

MCL

55

16.7

69.4

11.5

5.42

  1. Comparison of STM to competing clustering methods for the yeast protein-protein interaction data set for clusters with 9 or more members. The Maximal clique does not identify clusters with 9 or more members. The footnote is the same to Table 4.
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Algorithms for Molecular Biology

ISSN: 1748-7188