Table 2 Comparing sensitivity of lossy versus lossless compression by Off-line with Extensible Motifs, as applied to real and fake protein families.
From: Mining, compressing and classifying with extensible motifs
File | File len | param density | Lossy | Lossless | Compr ratio % | |
|---|---|---|---|---|---|---|
K | D | |||||
acnucl | 4197 | 10 | 3 | 1717 | 2425 | |
4197 | 5 | 3 | 1757 | 2370 | ||
acnucl-mix | 4149 | 10 | 3 | 1864 | 2629 | +8.4 |
4149 | 5 | 3 | 1972 | 2621 | +10.6 | |
gprot | 25482 | 30 | 3 | 7003 | 9879 | |
25482 | 20 | 3 | 7399 | 10276 | ||
gprot-mix | 25335 | 30 | 3 | 8179 | 11945 | +20.9 |
25335 | 20 | 3 | 8386 | 11978 | +16.5 | |
succ | 16297 | 20 | 3 | 4994 | 7449 | |
16297 | 10 | 3 | 4977 | 7466 | ||
succ-mix | 16410 | 20 | 3 | 5929 | 8803 | +18.2 |
16410 | 10 | 3 | 6415 | 8962 | +19.2 | |