Figure 9
From: Efficient and accurate P-value computation for Position Weight Matrices
Runtime of TFM-Pvalue – From P-value to Score without any granularity bound. This histogram shows time measurements for the P-VALUE TO SCORE algorithm without any granularity bound. The algorithm stops when it is guaranteed to find the exact P-value, without error. We ran tests on a variety of P-value parameters: 10-3, 10-4, 10-5, and 10-6. As previously, we report the proportion of matrices for which the runtime was less then 0.1 second, between 0.1 second and 1 second, between 1 second and 1 minute and greater than 1 minute.