Figure 3
From: Evaluating deterministic motif significance measures in protein databases
Correlation Matrix for the 1000 motifs. Correlation matrix of the 14 measures in the evaluation of the 1000 motifs. Parameters for the synthetic generation of the motifs: T P ∈ [15, 50] (50 sequences for the positive dataset); F P ∈ [0, 35] (100 sequences in the negative dataset); Length ∈ [5, 7] amino acid symbols and numGap ∈ [0, 5]. Dark areas indicate a higher correlation between the respective measures. Due to the symmetric nature of the matrix only the lower triangular part is presented.