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Table 4 Evaluation of contiguous motifs on protein synthetic data.

From: Evaluating deterministic motif significance measures in protein databases

Motif Supp ZScore LogOdd Pratt IG
SSN 1 3710 1 2130 1
IYKQ 1 1533 2 11817 1
NDFNE 1 1 1 13483 1
PLMPES 1 1 2 4973 1
MRKMVTAG 1 1 6 9818 1
TKYEETGAFK 1 1 43 7350 1
DRTGMHSIFFLP 1 1 3 11721 1
MTENKVGESICPAAPN 1 1 29 9589 1
R m 1 0.0015 0.0919 1.128E-4 1
  1. Ranking results for eight synthetic protein datasets. Each dataset contains 50 sequences of length 300. Target motifs have a support of 100%. Motifs are ranked with Information-theoretic measures and support. Last row gives the R m values of each measure, where the best results are obtained by IG and support.