Skip to main content

Advertisement

Table 9 Variability values for the fourteen measure on the Prosite dataset.

From: Evaluating deterministic motif significance measures in protein databases

Measure Avg Std S t d A v g MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaqcfa4aaSaaaeaacqWGtbWucqWG0baDcqWGKbazaeaacqWGbbqqcqWG2bGDcqWGNbWzaaaaaa@3439@
Sn 0.910 0.122 0.134
Sp 1.000 0.000 0.000
PPV 0.968 0.091 0.094
F 0.931 0.099 0.106
Corr 0.935 0.091 0.097
Dp 0.919 0.122 0.132
Fpr 0.000 0.000 0.000
IG 552.031 755.787 1.373
Pratt 20.763 13.088 0.631
LogOdd 3.736 3.002 0.817
J -8.888 3.119 0.359
I 0.005 0.007 1.400
S 7.467 2.612 0.349
ZScore 3 M 124 M 41.3 M
  1. Average, standard deviation and coefficient of variation of the 1330 rigid gap Prosite motifs.