Algorithms for Molecular Biology

Table 9 Variability values for the fourteen measure on the Prosite dataset.

From: Evaluating deterministic motif significance measures in protein databases

Measure	Avg	Std	$\frac{S t d}{A v g}$
Sn	0.910	0.122	0.134
Sp	1.000	0.000	0.000
PPV	0.968	0.091	0.094
F	0.931	0.099	0.106
Corr	0.935	0.091	0.097
Dp	0.919	0.122	0.132
Fpr	0.000	0.000	0.000
IG	552.031	755.787	1.373
Pratt	20.763	13.088	0.631
LogOdd	3.736	3.002	0.817
J	-8.888	3.119	0.359
I	0.005	0.007	1.400
S	7.467	2.612	0.349
ZScore	3 M	124 M	41.3 M

Average, standard deviation and coefficient of variation of the 1330 rigid gap Prosite motifs.

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ISSN: 1748-7188

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