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Figure 7 | Algorithms for Molecular Biology

Figure 7

From: A spatio-temporal mining approach towards summarizing and analyzing protein folding trajectories

Figure 7

β -sheets vs. maximally connected bit-patterns: an example. (a) A type 0 bit-pattern is identified in the 24201thframe of the GSGS T1 trajectory. This bit-pattern corresponds to the the connected 'x'-es in the table, where an 'x' indicates two corresponding C α atoms are in contact,'-' otherwise. It consists of C α atoms from 5 through 20. (b) The 3D conformation of this frame, where the 5–20 C α atoms resembles a β-sheet of two turns.

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