RNAstrand: reading direction of structured RNAs in multiple sequence alignments

Table 3 Comparison of classification accuracies versus RNAz.

			Naïve RNAz-based classification
			correct	incorrect
RNAstrand	fwd	correct	17961	7579
		incorrect	1570	3810
	rev	correct	17855	7521
		incorrect	1676	3868
	all	correct	35816	15100
		incorrect	3246	7678

Strand prediction of RNAstrand compared to naïve prediction of RNAz. The first row of the table refers to alignments of known ncRNA loci given in the direction of the ncRNA. The second row belongs to the corresponding reverse complementary alignments. The last row summarizes the first and second row.

ISSN: 1748-7188