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Table 1 Summary of UTR datasets

From: A scoring matrix approach to detecting miRNA target sites

Organism

No. Sequences

Sequence type

No. Nucleotides

C. elegans

12,172

UTR

2,724,326

D. melanogaster

11,277

UTR

4,612,168

M. musculus

20,271

UTR

20,009,781

H. sapiens

27,685

UTR

30,673,888

A. thaliana

31,527

cDNA

46,447,255

  1. "No. sequences" gives total number of unique sequences in this dataset; "Sequence type" gives the sequence type used (UTR or cDNA); "No. nucleotides" gives total number of nucleotides in the UTR set.
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Algorithms for Molecular Biology

ISSN: 1748-7188