Skip to main content

Table 2 SBM scan summary obtained using a score threshold of 1

From: A scoring matrix approach to detecting miRNA target sites

Organism miRNA Validated targets Recovered targets Potential novel targets
C. elegans cel-miR-273 2 2 0
C. elegans cel-let-7 15 15 1708
C. elegans cel-miR-84 7 7 123
D. melanogaster dme-miR-11 4 4 0
D. melanogaster dme-miR-2 4 4 0
D. melanogaster dme-miR-4 8 8 23
D. melanogaster dme-miR-7 15 15 28
M. musculus mmu-miR-124 3 3 0
M. musculus mmu-miR-206 3 3 0
H. sapiens hsa-miR-1 4 4 0
H. sapiens hsa-miR-122 3 3 0
A. thaliana ath-miR-163 5 5 0
A. thaliana ath-miR-172 6 6 0
A. thaliana ath-miR-390 1 1 0
A. thaliana ath-miR-398 2 2 0
A. thaliana ath-miR-408 2 3 1
  1. "miRNA" gives miRBase miRNA identifier; "Validated targets" gives number of unique validated targets present in the starting alignment; "Recovered targets" gives number of validated targets in the input alignment that were recovered; "Predicted novel targets" gives number of candidate target sequences (other than the validated targets) predicted by the SBM method.
\