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Table 2 SBM scan summary obtained using a score threshold of 1

From: A scoring matrix approach to detecting miRNA target sites

Organism

miRNA

Validated targets

Recovered targets

Potential novel targets

C. elegans

cel-miR-273

2

2

0

C. elegans

cel-let-7

15

15

1708

C. elegans

cel-miR-84

7

7

123

D. melanogaster

dme-miR-11

4

4

0

D. melanogaster

dme-miR-2

4

4

0

D. melanogaster

dme-miR-4

8

8

23

D. melanogaster

dme-miR-7

15

15

28

M. musculus

mmu-miR-124

3

3

0

M. musculus

mmu-miR-206

3

3

0

H. sapiens

hsa-miR-1

4

4

0

H. sapiens

hsa-miR-122

3

3

0

A. thaliana

ath-miR-163

5

5

0

A. thaliana

ath-miR-172

6

6

0

A. thaliana

ath-miR-390

1

1

0

A. thaliana

ath-miR-398

2

2

0

A. thaliana

ath-miR-408

2

3

1

  1. "miRNA" gives miRBase miRNA identifier; "Validated targets" gives number of unique validated targets present in the starting alignment; "Recovered targets" gives number of validated targets in the input alignment that were recovered; "Predicted novel targets" gives number of candidate target sequences (other than the validated targets) predicted by the SBM method.