Table 3 Sum-of-pairs scores on DIRMBASE 1
From: DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment
Method (DNA) | REF1 | REF2 | REF3 | REF4 | Total |
|---|---|---|---|---|---|
DIALIGN-TX | 94.38 | 92.85 | 95.44 | 95.70 | 94.59 |
DIALIGN-T 0.2.2 | 64.00-- | 61.22-- | 64.96-- | 65.24-- | 63.85-- |
DIALIGN 2.2 | 92.61- | 91.10- | 94.62- | 94.13- | 93.12-- |
CLUSTAL W2 | 06.79-- | 08.27-- | 18.51-- | 29.09-- | 15.66-- |
T-COFFEE 5.56 | 14.71-- | 18.88-- | 32.08-- | 43.39-- | 27.62-- |
POA V2 | 32.03-- | 27.40-- | 28.78-- | 32.18-- | 30.10-- |
MAFFT 6.240 L-INSi | 52.40-- | 48.81-- | 49.77-- | 57.47-- | 52.36-- |
MAFFT 6.240 E-INSi | 92.420 | 84.15-- | 87.91- | 89.36- | 88.46-- |
MUSCLE 3.7 | 48.17-- | 54.40-- | 56.57-- | 60.24-- | 56.84-- |
PROBCONSRNA 1.10 | 13.00-- | 12.94-- | 20.28-- | 32.56-- | 19.69-- |