Skip to main content

Table 1 Randomized sites (at qcutoff = 0.8) in the 13 different individual protein-coding genes within the 31 currently available complete mitochondrial genomes of squamata. sngl: number of singleton positions, %rnd: percentage of randomized variable sites.

From: Noisy: Identification of problematic columns in multiple sequence alignments

Gene length sngl q ≥ 0.8 %rnd
atp6 684 42 405 34.65
atp8 171 7 108 32.75
cox1 1536 88 1008 28.65
cox2 672 34 443 29.02
cox3 786 45 516 28.63
cytb 1131 74 676 33.69
nd1 942 44 589 32.80
nd2 1032 63 626 33.24
nd3 345 11 222 32.46
nd4 1371 65 831 34.65
nd4l 288 16 183 30.90
nd5 1803 103 1040 36.61
nd6 540 25 373 26.30