Table 1 Rooted triplets as constrained unrooted triplets
From: Auto-validating von Neumann rejection sampling from small phylogenetic tree spaces
Rooted and Clocked Trees, it := (it0, it1), i ∈ {1, 2, 3} | Unrooted Trees 4t := (4t1, 4t2, 4t3) | |||
|---|---|---|---|---|
Labeled Tree | Newick Representation of it | 4 t 1 | 4 t 2 | 4 t 3 |
1t := (1t0, 1t1) | ((H:1t1, C:1t1):1t0, G:1t0 + 1t1)) | 1 t 1 | 1 t 1 | 1t1 + 1t0 + 1t0 |
2t := (2t0, 2t1) | ((C:2t1, G:2t1):2t0, H:2t0 + 2t1)) | 2t1 + 2t0 + 2t0 | 2 t 1 | 2 t 1 |
3t := (3t0, 3t1) | ((H:3t1, G:3t1):3t0, C:3t0 + 3t1)) | 3 t 1 | 3t1 + 3t0 + 3t0 | 3 t 1 |