From: iTriplet, a rule-based nucleic acid sequence motif finder
Models | Neighborhood Probability | MotifEnumerator | RISOTTO | PMSprune | iTriplet | iTriplet (parallel) |
---|---|---|---|---|---|---|
11,2 | 0.7% | 6 s | 2.2 s | 1 s | 2 s | 1 s |
12,3 | 5.4% | 1 m | 40 s | 4 s | 33 s | 18 s |
13,3 | 2.4% | 2 m | 33 s | 2 s | 6 s | 4 s |
14,4 | 11% | -a | 8 m | 1 m | 3 m | 2 m |
15,4 | 5.6% | - | 6 m | 16 s | 36 s | 19 s |
16,5 | 19% | - | 82 m | 13.5 m | 26 m | 13 m |
18,6 | 28% | - | -b | -b | 3 h | 1.5 h |
19,6 | 18% | - | - | - | 27 m | 14 m |
24,8 | 23% | - | - | - | 4 h | 2 h |
28,8 | 3% | - | - | - | 19 s | 10 s |
30,9 | 5% | - | - | - | 2.3 m | 1.5 m |
38,12 | 7% | - | - | - | 1 h | 33 m |
40,12 | 3% | - | - | - | 5 m | 4 m |