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Figure 5 | Algorithms for Molecular Biology

Figure 5

From: Lossless filter for multiple repeats with bounded edit distance

Figure 5

Tests on random generated sequences. Application of the three versions of TUIUIU with parameters (L, d, r) = (1000, 100, 5) on five random sequences of a total size of 1.5 Mb, each containing approximate occurrences of a planted repeat of length 1 kb. We planted repeats whose occurrences have a pairwise maximum distance that ranges from 0 to 300 (each test has the same value for all pairs). Each test was performed 20 times: the average result is reported.

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