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Figure 8 | Algorithms for Molecular Biology

Figure 8

From: Lossless filter for multiple repeats with bounded edit distance

Figure 8

Influence of q-gram size q over selectiveness and running time. Influence of q-gram size q over selectiveness and running time for CFTR dataset with parameters (L, d, r) = (100, 12, 5). This test shows that EXCELLENT is essential when using a small q, which enables to filter for a high error rate such as 12%. For instance, with q = 3, EXCELLENT reduces the selectiveness of 100% observed for both FINE and GOOD to 0.01%.

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