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Table 2 Ribosomal data-set

From: An image processing approach to computing distances between RNA secondary structures dot plots

Index in the data set

Sequence name

Length (nt.)

Our predicted mutation

Mutation with largest RNAdistance [6]

1

A_(765–816)

52

G7C

G7C

2

E_(68)

46

C28G

C28G

3

A_(1241–1296)

56

G33C(A)

G32C

4

A_(820–879)

53

C4A

C4A

5

A_(588–651)

64

G38C

G38C

6

A_(995–1045)

55

G41C

G41C

7

B_(1052–1107)

56

G55A(B)

C28U

8

B_(589–668)

82

G37U

G37U

9

A_(136–227)

93

G10U

G10U

10

A_(1113–1187)

74

G60U

G60U

11

B_(865–911)

46

C38G

C38G

12

E_(2676–2731)

57

C3A

C3A

13

E_(99,100,101)

79

G9C

G9C

14

E_(90,91,92)

76

G44A(A)

G43A

15

E_(89)

43

G36C(B)

A23C

16

D_(8,9,10)

53

C36G

G31U

17

A_(1420–1480)

56

G47C

G47C

18

A_(240–286)

47

U5C

U5C

19

A_(442–492)

41

G24U

G24U

20

E_(65,66)

57

U22A

U22A

21

E_(86,87)

39

G29A(B)

G5C

  1. This table summarizes the results for the ribosomal data set, comparing our system results to the results with the largest RNAdistances. In the fourth column we present our system's predicted mutation. When the resulted mutations are identical to RNAdistance, they are presented in bold face. (A) Marks the 2 sequences with a different mutation but similar structure. (B) Marks the 3 sequences with different secondary structure (refer also to Figure 8 and Additional file 1).