Table 2 Size of the regular expression (regex) and pattern complexity (L) for a selected subset of PROSITE signatures.
PROSITE signature | Accession number | pattern size | L |
|---|---|---|---|
RGD | PS00016 | 3 | 22 |
ER_TARGET | PS00014 | 3 | 28 |
PPASE | PS00387 | 7 | 41 |
ALDEHYDE_DEHYDR_GLU | PS00687 | 8 | 44 |
PROKAR_NTER_METHYL | PS00409 | 21 | 46 |
GLY_RADICAL_1 | PS00850 | 9 | 77 |
PEP_ENZYMES_PHOS_SITE | PS00370 | 12 | 96 |
PUR_PYR_PR_TRANSFER | PS00103 | 13 | 102 |
PILI_CHAPERONE | PS00635 | 18 | 226 |
SIGMA54_INTERACT_2 | PS00676 | 16 | 313 |
EFACTOR_GTP | PS00301 | 16 | 320 |
ALDEHYDE_DEHYDR_CYS | PS00070 | 12 | 331 |
ADH_ZINC | PS00059 | 13 | 478 |
THIOLASE_1 | PS00098 | 19 | 637 |
SUGAR_TRANSPORT_1 | PS00216 | 15 to 17 | 796 |
FGGY_KINASES_2 | PS00445 | 21 to 22 | 2668 |
PTS_EIIA_TYPE_2_HIS | PS00372 | 16 | 2758 |
MOLYBDOPTERIN_PROK_3 | PS00551 | 27 to 28 | 3907 |
SUGAR_TRANSPORT_2 | PS00217 | 26 | 6889 |