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Table 1 Inverse folding times for 100 executions of Inv for various RNA pseudoknot structures.

From: Inverse folding of RNA pseudoknot structures

RNA structure

length

trials

total time

success rate

TPK-70.28 [42]

40

100

4 m 57.81s

100%

Ec_PK2 [43]

59

100

5 m 33.28s

100%

PMWaV-2 [44]

62

100

1 m 7.12s

100%

tRNA

76

100

5 m 2.49s

100%

  1. In all cases all trials generated successfully sequences of the respective neutral networks.
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Algorithms for Molecular Biology

ISSN: 1748-7188