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Table 5 Grid search on the parameters s cov and s mcov

From: Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry

s cov /s mcov

1

2

3

4

5

6

7

8

9

10

1

73 (50)

84 (65)

86 (67)

85 (65)

85 (65)

85 (65)

85 (65)

85 (65)

85 (65)

85 (65)

2

63 (36)

73 (50)

79 (60)

84 (65)

86 (67)

86 (67)

86 (67)

85 (65)

85 (65)

85 (65)

3

61 (33)

64 (37)

73 (50)

79 (60)

80 (61)

84 (65)

86 (67)

86 (67)

86 (67)

86 (67)

4

61 (33)

63 (36)

64 (37)

73 (50)

79 (60)

79 (60)

80 (61)

84 (65)

86 (67)

86 (67)

5

61 (33)

61 (33)

64 (37)

64 (37)

73 (50)

79 (60)

79 (60)

80 (61)

80 (61)

84 (65)

6

61 (33)

61 (33)

63 (36)

64 (37)

64 (37)

73 (50)

79 (60)

79 (60)

79 (60)

80 (61)

7

61 (33)

61 (33)

61 (33)

64 (37)

64 (37)

64 (37)

73 (50)

79 (60)

79 (60)

79 (60)

8

61 (33)

61 (33)

61 (33)

63 (36)

64 (37)

64 (37)

64 (37)

73 (50)

79 (60)

79 (60)

9

61 (33)

61 (33)

61 (33)

61 (33)

64 (37)

64 (37)

64 (37)

64 (37)

73 (50)

79 (60)

10

61 (33)

61 (33)

61 (33)

61 (33)

63 (36)

64 (37)

64 (37)

64 (37)

64 (37)

73 (50)

  1. Grid search on the parameters s cov and s mcov of the modified greedy set cover algorithm (Greedy MC) on the WNT pathway, N-C-terminal epitopes of length 4: solution size (multicovered proteins)