Skip to main content

Table 1 Sample Misincorporation Counts Under H0

From: Estimating the evidence of selection and the reliability of inference in unigenic evolution

 

Unselected Clone Counts

Selected Clone Counts

-

A

C

G

T

A

C

G

T

A

23 656

18

27

182

24 024

11

12

80

C

65

18 045

1

184

24

18 058

1

72

G

282

4

11 176

29

154

0

11 203

9

T

270

29

19

15 439

71

27

7

15 673

Total

24 273

18 096

11 223

15 834

24 273

18 096

11 223

15 834

  1. Sample mutagenic PCR counts C for 30 cycles of mutagenic PCR on the 798-nucleotide wild-type sequence for the I-Bmol homing endonuclease, as sequenced from 87 clones. Matrix entry C ij represents the number of observed misincorporations from wild-type nucleotide j to clone-type nucleotide i in the 'unselected' population (top). For comparative purposes, misincorporation counts from the 'selected' population are also presented (bottom) although these are not used to estimate parameter matrix T.