From: Accuracy of phylogeny reconstruction methods combining overlapping gene data sets
Parameter | Options | |
---|---|---|
Data set | S: | small |
L: | large | |
Taxa coverage | c: | complete |
m: | missing | |
True gene trees | E: | subtrees of species tree |
R α : | rate of evolution assigned randomly from a Γ-distribution with parameter α (i.e., mean 1 and variance 1/α ) | |
P: | substitution parameters and branch lengths gene-specific | |
G: | trees gene-specific | |
T θ : | trees random by coalescent process with parameter θ | |
Reconstructed | e: | equal to true gene trees |
gene trees | n: | normal sequence length and ML estimation |