TY - JOUR AU - Shibuya, Tetsuo AU - Jansson, Jesper AU - Sadakane, Kunihiko PY - 2010 DA - 2010/01/04 TI - Linear-time protein 3-D structure searching with insertions and deletions JO - Algorithms for Molecular Biology SP - 7 VL - 5 IS - 1 AB - Two biomolecular 3-D structures are said to be similar if the RMSD (root mean square deviation) between the two molecules' sequences of 3-D coordinates is less than or equal to some given constant bound. Tools for searching for similar structures in biomolecular 3-D structure databases are becoming increasingly important in the structural biology of the post-genomic era. SN - 1748-7188 UR - https://doi.org/10.1186/1748-7188-5-7 DO - 10.1186/1748-7188-5-7 ID - Shibuya2010 ER -