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Table 2 FDAFSA vs. PromMachine.

From: Prediction of plant promoters based on hexamers and random triplet pair analysis

Methods (n-mers used)

Average Sensitivity of 5-fold cross validation (%)

Average Specificity of 5-fold cross validation (%)

FDAFSA

(hexamers)

84*

86*

PromMachine

(tetramers)

86+

81+

  1. *Accuracies are measured using the top 25% features from FDAFSA sequences in 1-pass. The measurements are then averaged for 5-passes.
  2. + This result is generated by implementing the PromMachine algorithm by ourselves using our dataset.
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Algorithms for Molecular Biology

ISSN: 1748-7188