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Table 2 Floating point approximations of the probabilities (relative frequencies) for the production rules of the SCFG Ĝ sto (rounded to three decimal places)

From: Random generation of RNA secondary structures according to native distributions

Nonterminal Nt

Probabilities of Rules with Premise Nt

S'

p ^ 1 :=1.000,

E

p ^ 2 :=0.021, p ^ 3 :=0.979,

S

p ^ 4 :=0.014, p ^ 5 :=0.986,

T

p ^ 6 :=0.868, p ^ 7 :=0.132,

C

p ^ 8 :=0.096, p ^ 9 :=0.904,

A

p ^ 10 :=1.000

L

p ^ 11 :=0.763, p ^ 12 :=0.040, p ^ 13 :=0.019, p ^ 14 :=0.037,

 

p ^ 15 :=0.007, p ^ 16 :=0.086, p ^ 17 :=0.048,

G

p ^ 18 :=0.304, p ^ 19 :=0.188, p ^ 20 :=0.308, p ^ 21 :=0.200,

D

p ^ 22 :=1.000

B

p ^ 23 :=0.390, p ^ 24 :=0.610,

F

p ^ 25 :=0.057, p ^ 26 :=0.341, p ^ 27 :=0.602,

H

p ^ 28 :=0.201, p ^ 29 :=0.799,

P

p ^ 30 :=0.109, p ^ 31 :=0.214, p ^ 32 :=0.201, p ^ 33 :=0.476,

Q

p ^ 34 :=0.171, p ^ 35 :=0.829,

R

p ^ 36 :=0.415, p ^ 37 :=0.585,

V

p ^ 38 :=1.000

W

p ^ 39 :=1.000

O

p ^ 40 :=1.000

J

p ^ 41 :=0.324, p ^ 42 :=0.676,

K

p ^ 43 :=0.293, p ^ 44 :=0.707,

M

p ^ 45 :=1.0000

X

p ^ 46 :=0.071, p ^ 47 :=0.929,

Y

p ^ 48 :=1.0000

Z

p ^ 49 :=0.051, p ^ 50 :=0.949,

N

p ^ 51 :=0.444, p ^ 52 :=0.556,

U

p ^ 53 :=0.212, p ^ 54 :=0.788.