Table 3 Expectation and variance of important parameters related to particular structural motifs of RNA secondary structure
From: Random generation of RNA secondary structures according to native distributions
Parameter | Expected Value | Variance | ||
|---|---|---|---|---|
| Â | Random | Native | Random | Native |
numunp | 848.179 | 839.956 | 98964.7 | 103426. |
numbps | 420.848 | 424.96 | 27785.3 | 31310.9 |
numurs | 179.73 | 181.822 | 4959.96 | 5117.47 |
nume | 1. | 1. | 0. | 0. |
numh | 36.6983 | 36.4818 | 196.935 | 185.596 |
nums | 321.18 | 324.26 | 16538.8 | 19343.4 |
numb | 20.6061 | 20.5782 | 87.1894 | 50.3103 |
numi | 26.1442 | 26.538 | 125.66 | 194.769 |
numm | 16.2197 | 17.1018 | 57.8874 | 41.0261 |
numhel | 99.6683 | 100.7 | 1549.24 | 1492.84 |
unpe | 106.014 | 79.8382 | 4039.69 | 3897.61 |
unph | 6.93534 | 6.93188 | 18.4264 | 77.464 |
unps | -- | -- | -- | -- |
unpb | 1.9948 | 1.99596 | 3.10283 | 6.87868 |
unpi | 7.14617 | 7.08869 | 16.5725 | 31.1197 |
unpm | 16.0122 | 16.2577 | 87.4906 | 195.497 |
unphel | -- | -- | -- | -- |
bpse | 9.41479 | 6.94105 | 29.1956 | 6.30949 |
bpsh | -- | -- | -- | -- |
bpss | 1. | 1. | 0. | 0. |
bpsb | 1. | 1. | 0. | 0. |
bpsi | 1. | 1. | 0. | 0. |
bpsm | 2.68212 | 2.72734 | 1.12921 | 1.21643 |
bpshel | 4.22249 | 4.22006 | 13.6266 | 5.52299 |