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Table 5 Floating point approximations of the probabilities (weights) λ i , 1 ≤ i ≤ 73 , for the production rules of the grammar Ĝ sto * (rounded to four decimal places)

From: Random generation of RNA secondary structures according to native distributions

Nonterminal Nt

 

Weights of Rules with Premise Nt

S'

λ1 : = 1.0000,

λ2 : = 0.0212,

λ3 : = 0.0003,

 

E

λ4 : = 0.9788,

λ5 : = 0.0134,

λ6 : = 0.0944,

λ7 : = 0.0013,

S

λ8 : = 0.8559,

λ9 : = 0.1304,

λ10 : = 0.0126,

λ11 : = 0.0181,

 

λ12 : = 0.0002,

   

C

λ13 : = 0.9036,

λ14 : = 0.0871,

  

A

λ15 : = 0.7630,

λ16 : = 0.0402,

λ17 : = 0.0186,

λ18 : = 0.0367,

 

λ19 : = 0.0072,

λ20 : = 0.0858,

λ21 : = 0.0484,

 

G

λ22 : = 0.3038,

λ23 : = 0.1884,

λ24 : = 0.3081,

λ25 : = 0.1996,

D

λ26 : = 1.0000,

λ27 : = 0.3896,

  

B

λ28 : = 0.6104,

λ29 : = 0.2378,

  

F

λ30 : = 0.0575,

λ31 : = 0.3409,

λ32 : = 0.6016,

λ33: = 0.1211,

H

λ34 : = 0.7987,

λ35 : = 0.1608,

  

P

λ36 : = 0.1085,

λ37 : = 0.2144,

λ38 : = 0.2011,

λ39 : = 0.4760,

Q

λ40 : = 0.1713,

λ41 : = 0.8287,

  

R

λ42 : = 0.4150,

λ43 : = 0.5850,

  

V

λ44 : = 1.0000,

λ45 : = 0.3243,

  

W

λ46 : = 1.0000,

λ47 : = 0.3243,

  

O

λ48 : = 1.0000,

λ49 : = 0.2928,

  

J

λ50 : = 0.6757,

λ51 : = 0.2191,

  

K

λ52 : = 0.7072,

λ53 : = 0.2071,

  

M

λ54 : = 1.0000,

λ55 : = 0.0510,

λ56 : = 0.0036,

λ57: = 0.0712,

 

λ58 : = 0.0036,

λ59 : = 0.0003,

  

X

λ60 : = 0.9288,

λ61 : = 0.1968,

  

Z

λ62 : = 0.4211,

λ63 : = 0.5279,

λ64 : = 0.1119,

λ65 : = 0.0215,

 

λ66 : = 0.0015,

λ67 : = 0.0300,

λ68 : = 0.0376,

λ69 : = 0.0080,

 

λ70 : = 0.0015,

λ71 : = 0.0001,

  

U

λ72 : = 0.7881,

λ73 : = 0.1670.

  
  1. Note that for i ∈ { 74 , ... , 105 } , λ i : = 1 holds.