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Table 1 Correspondence of %id and PAM.

From: Comparative analysis of the quality of a global algorithm and a local algorithm for alignment of two sequences

%id

PAM

%id

PAM

99

1

50

80

95

5

45

94

90

11

40

112

85

17

35

133

80

23

30

159

75

30

25

195

70

38

20

246

65

47

15

328

60

56

10

489

55

67

5

830

  1. The average fraction of coincidence of the ancestor and mutant sequences (%id) and the corresponding PAM value. Only substitutions are allowed in the mutant sequence.
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Algorithms for Molecular Biology

ISSN: 1748-7188