Skip to main content

Table 1 Variants selected by the greedy RLS algorithm

From: Wrapper-based selection of genetic features in genome-wide association studies through fast matrix operations

SNP

Gene

Chromosome

Position

rs7837736

Intergenic

8

15296703

rs1908465

Intergenic

8

15308433

rs17116117

HTR3B

11

113801591

rs10843660

Intergenic

12

30368457

rs17667894

MIR17HG

13

92014309

rs17116145

HTR3B

11

113804326

rs10771657

Intergenic

12

30359294

rs17459885

Intergenic

12

30360879

rs16837871

MIR378D1

4

5941112

rs7691494

C4orf50

4

5942649

rs6588810

ASMT

X

1753118

rs11005510

Intergenic

10

58532989

rs6840033

SCOC

4

141228861

rs10499044

Intergenic

6

107141295

rs2798360

LOC100422737

6

107148473

  1. The list of the top 15 selected features on the entire cohort. The first column represents the SNP identifier. The second column indicates which gene the particular SNP is mapped to, or if it can not be mapped to any gene then it is marked as an intergenic sequence. The third and fourth columns are the chromosome number and base-pairs location of the SNP, respectively.