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Figure 10 | Algorithms for Molecular Biology

Figure 10

From: Getting DNA copy numbers without control samples

Figure 10

These figures show the DNA copy numbers using ACNE, ACNE+NSA and CN5 and the B Allele Fraction for chromosome X in sample GIGAS_g_GAINmixHapMapAffy2_GenomeWideEx_6_A04_31266 from the GIGAS HapMap dataset hybridized to GenomeWideSNP 6.0. The number of copies and the fraction of the B allele show that this sample is male. The total copy number for the autosomal regions -beginning of p arm and middle of q arm- are closer to two copies.

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