| | |
SISSRs
|
findPeaks
|
MACS
|
|---|
|
Sample
|
Control
|
No. Peaks
|
% with motif
|
No. Peaks
|
% with motif
|
No. Peaks
|
% with motif
|
|---|
|
IgG
| |
88043
|
1 (1)
|
6022
|
1 (2)
|
2712
|
2 (2)
|
|
Input
| |
93067
|
3 (4)
|
9719
|
5 (5)
|
10015
|
3 (4)
|
|
MAX
| |
24517
|
5 (10)
|
11878
|
7 (15)
|
14133
|
6 (14)
|
|
MAX
|
IgG
|
3345
|
12 (30)
|
4932
|
10 (26)
|
18039
|
6 (12)
|
|
MAX
|
Input
|
4302
|
8 (24)
|
4963
|
10 (26)
|
14475
|
6 (14)
|
|
MAX (IgG norm)
| |
1066
|
26 (51)
|
3533
|
16 (36)
|
2191
|
13 (38)
|
|
MAX (Input norm)
| |
1082
|
26 (52)
|
3493
|
16 (37)
|
2178
|
13 (38)
|
|
MAX (IgG/Input norm)
| |
1076
|
26 (53)
|
3489
|
16 (37)
|
2169
|
13 (38)
|
|
Input
| |
13773
|
2 (2)
|
47
|
2 (0)
|
356
|
2 (1)
|
|
FOXA1
| |
27978
|
27 (40)
|
2572
|
55 (70)
|
3598
|
44 (70)
|
|
FOXA1
|
Input
|
890
|
58 (71)
|
2626
|
57 (72)
|
3571
|
42 (70)
|
|
FOXA1 (Input norm)
| |
256
|
73 (75)
|
599
|
60 (74)
|
580
|
45 (73)
|
- For each data set, the number of peaks detected and the percentages of these that contained the expected binding motif are reported. Numbers within parentheses correspond to the fraction found in the top scoring 20% regions detected.
