| |
Scaffold Density
|
|---|
|
Method
|
20
|
50
|
75
|
100
|
Average
|
|---|
|
MRP(PAUP*)
|
76.14 (15.45)
|
55.53 (19.99)
|
43.87 (7.72)
|
54.56 (10.24)
|
56.03 (17.67)
|
|
MRP(TNT)
|
2.01 (0.64)
|
2.95 (1.31)
|
3.27 (0.59)
|
4.33 (0.75)
|
3.24 (1.19)
|
|
MRL(RAxML)
|
99.86 (28.15)
|
111.57 (48.06)
|
81.57 (28.87)
|
87.33 (11.59)
|
94.22 (33.76)
|
|
SuperFine+MRP(PAUP*)
|
7.14 (1.10)
|
6.16 (1.28)
|
8.13 (1.27)
|
5.56 (1.09)
|
6.73 (1.57)
|
|
SuperFine+MRP(TNT)
|
0.54 (0.11)
|
0.80 (0.09)
|
0.84 (0.16)
|
1.07 (0.17)
|
0.83 (0.23)
|
|
SuperFine+MRL(RAxML)
|
1.00 (0.14)
|
1.56 (0.94)
|
1.32 (0.71)
|
1.27 (0.23)
|
1.30 (0.64)
|
- We show the average running times, in minutes, to calculate the 1000-taxon supertrees estimated from 25 clade-based source trees and 1 scaffold tree. The standard deviation is shown in parenthesis. The lowest running time for each scaffold factor is shown in bold.
