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Table 11 Running times for 500-taxon model conditions

From: MRL and SuperFine+MRL: new supertree methods

  Scaffold Density
Method 20 50 75 100 Average
MRP(PAUP*) 8.98 (1.66) 8.96 (1.43) 9.58 (2.28) 8.12 (1.63) 8.91 (1.86)
MRP(TNT) 0.32 (0.15) 0.42 (0.12) 0.45 (0.11) 0.53 (0.10) 0.43 (0.14)
MRL(RAxML) 18.99 (6.88) 19.24 (4.72) 20.35 (5.96) 18.35 (4.84) 19.24 (5.65)
SuperFine+MRP(PAUP*) 4.75 (1.46) 4.30 (1.23) 3.24 (1.89) 5.87 (1.53) 4.53 (1.82)
SuperFine+MRP(TNT) 0.22 (0.09) 0.27 (0.08) 0.31 (0.07) 0.41 (0.23) 0.30 (0.15)
SuperFine+MRL(RAxML) 0.40 (0.13) 0.49 (0.12) 0.58 (0.13) 0.55 (0.31) 0.51 (0.20)
  1. We give the average running times, in minutes, to calculate the 500-taxon supertrees estimated from 15 clade-based source trees and 1 scaffold tree. The standard deviation is shown in parenthesis. The lowest running time for each scaffold factor is shown in bold.