| |
Scaffold Density
|
|---|
|
Method
|
20
|
50
|
75
|
100
|
Average
|
|---|
|
MRP(PAUP*)
|
8.98 (1.66)
|
8.96 (1.43)
|
9.58 (2.28)
|
8.12 (1.63)
|
8.91 (1.86)
|
|
MRP(TNT)
|
0.32 (0.15)
|
0.42 (0.12)
|
0.45 (0.11)
|
0.53 (0.10)
|
0.43 (0.14)
|
|
MRL(RAxML)
|
18.99 (6.88)
|
19.24 (4.72)
|
20.35 (5.96)
|
18.35 (4.84)
|
19.24 (5.65)
|
|
SuperFine+MRP(PAUP*)
|
4.75 (1.46)
|
4.30 (1.23)
|
3.24 (1.89)
|
5.87 (1.53)
|
4.53 (1.82)
|
|
SuperFine+MRP(TNT)
|
0.22 (0.09)
|
0.27 (0.08)
|
0.31 (0.07)
|
0.41 (0.23)
|
0.30 (0.15)
|
|
SuperFine+MRL(RAxML)
|
0.40 (0.13)
|
0.49 (0.12)
|
0.58 (0.13)
|
0.55 (0.31)
|
0.51 (0.20)
|
- We give the average running times, in minutes, to calculate the 500-taxon supertrees estimated from 15 clade-based source trees and 1 scaffold tree. The standard deviation is shown in parenthesis. The lowest running time for each scaffold factor is shown in bold.
