| |
Scaffold Density
|
|---|
|
Method
|
20
|
50
|
75
|
100
|
Average
|
|---|
|
MRP(PAUP*)
|
2653 (276)
|
2981 (290)
|
3141.30 (428)
|
3390 (423)
|
3075 (449)
|
|
MRP(TNT)
|
2625 (268)
|
2962 (292)
|
3120 (421)
|
3390 (423)
|
3059 (452)
|
|
MRL(RAxML)
|
2618 (275)
|
2969 (293)
|
3143 (417)
|
3424 (429)
|
3075 (463)
|
|
SuperFine+MRP(PAUP*)
|
2612 (275)
|
2960 (294)
|
3120 (421)
|
3390 (423)
|
3056 (456)
|
|
SuperFine+MRP(TNT)
|
2614 (276)
|
2960 (294)
|
3120 (421)
|
3390 (423)
|
3056 (456)
|
|
SuperFine+MRL(RAxML)
|
2628 (277)
|
2980 (294)
|
3141 (421)
|
3407 (425)
|
3075 (457)
|
|
True Tree
|
2788 (294)
|
3144 (307)
|
3308 (411)
|
3578 (405)
|
3241 (456)
|
- We present the average MRP scores (MP scores with respect to the MRP matrix) for the 1000-taxon supertrees. The scaffold density is the percentage of the full taxon set that is present in the scaffold tree. The standard deviation is shown in parenthesis. All scores are rounded to the nearest integer. The lowest MRP score for each scaffold density is shown in bold.
