Skip to main content

Table 11 Effect of model selection on reconstruction accuracy for sequences of length 5000 with very high evolutionary rates

From: Invariant based quartet puzzling

 

Jukes Cantor BSI Invariants

Kimura 2 Parameter Invariants

Sequences generated under Jukes Cantor model assumptions for tree AA

24

12

Sequences generated under Kimura 2 Parameter model assumptions for tree AA

56

69

Sequences generated under Jukes Cantor model assumptions for tree CC

99

84

Sequences generated under Kimura 2 Parameter model assumptions for tree CC

63

88

  1. Percentage of reconstructed trees for data data sets generated by Jukes Cantor versus Kimura 2 parameter model assumptions.